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In X-3 Charles is giving a lecture on ethics as it pertains to mutant powers. He asks the students about where the line is drawn and what is deemed going too far.
He gives an example of a comatose man, who had been in a coma since birth with little to no brain activity whatsoever. His twin brother, was fine. This man was kept alive with machines for his entire life, and would it be ethical to use a power to transfer the mind of say a man with terminal cancer into the body of this man who had no brain activity.
Basically, the comatose man was Charles Xavier's twin brother. At the point that Jean desintigrated him, Charles projected his mind into the body of his twin brother, who would share the exact same genetic makeup as his body had, retaining the mutant X gene.
After the credits roll, a bearded Charles Xavier (Patrick Stewart with an oxygen mask on) turns to Moira McTaggart and says Hello.
The only thing that is not explained is why Charles is once again wheelchair bound if he's transferred into his twin's body.
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She did not open her eyes this morning. I don't know what else to say.
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